Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 AC005332.7-201ENST00000614046 2005 ntBASIC20.65■□□□□ 0.9
PCDHGC3Q9UN70 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGC3Q9UN70 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHGC3Q9UN70 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 AC239809.2-201ENST00000415381 517 ntBASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 AC124016.1-201ENST00000609552 612 ntBASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 ZNF815P-204ENST00000434898 1737 ntBASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHGC3Q9UN70 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 KRASP1-201ENST00000407852 552 ntBASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 AC004264.1-201ENST00000608354 794 ntBASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGC3Q9UN70 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 TSPY20P-201ENST00000450910 630 ntBASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGC3Q9UN70 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 FAM201B-201ENST00000458407 597 ntBASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 C1QL1P1-201ENST00000568105 661 ntBASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 ITM2C-210ENST00000620962 501 ntBASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGC3Q9UN70 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms