Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBQLN1Q9UMX0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 ABBA01031674.1-201ENST00000635145 728 ntBASIC21■□□□□ 0.95
UBQLN1Q9UMX0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
UBQLN1Q9UMX0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
UBQLN1Q9UMX0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
UBQLN1Q9UMX0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 FSCN1P1-201ENST00000568912 1481 ntBASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 RBM17P1-201ENST00000453646 1190 ntBASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.97■□□□□ 0.95
UBQLN1Q9UMX0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 UNC93B2-201ENST00000285383 730 ntBASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 MIR6786-201ENST00000616843 113 ntBASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBQLN1Q9UMX0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms