Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF1Q9UBU9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 KRT16P5-201ENST00000455284 522 ntBASIC21.02■□□□□ 0.96
NXF1Q9UBU9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF1Q9UBU9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NXF1Q9UBU9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NXF1Q9UBU9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NXF1Q9UBU9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NXF1Q9UBU9 AC125437.2-201ENST00000625180 2167 ntBASIC21.02■□□□□ 0.95
NXF1Q9UBU9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
NXF1Q9UBU9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 TUBB8P6-201ENST00000436895 1288 ntBASIC21.01■□□□□ 0.95
NXF1Q9UBU9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 KRT18P16-201ENST00000510337 1294 ntBASIC21.01■□□□□ 0.95
NXF1Q9UBU9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF1Q9UBU9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21■□□□□ 0.95
NXF1Q9UBU9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21■□□□□ 0.95
NXF1Q9UBU9 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NXF1Q9UBU9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21■□□□□ 0.95
NXF1Q9UBU9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21■□□□□ 0.95
NXF1Q9UBU9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21■□□□□ 0.95
NXF1Q9UBU9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
NXF1Q9UBU9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21■□□□□ 0.95
NXF1Q9UBU9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NXF1Q9UBU9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NXF1Q9UBU9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NXF1Q9UBU9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21■□□□□ 0.95
NXF1Q9UBU9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21■□□□□ 0.95
NXF1Q9UBU9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NXF1Q9UBU9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NXF1Q9UBU9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms