Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COMMD9Q9P000 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COMMD9Q9P000 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COMMD9Q9P000 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 AL691432.2-201ENST00000607222 2038 ntBASIC16.62■□□□□ 0.25
COMMD9Q9P000 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 RARRES2P11-201ENST00000635158 484 ntBASIC16.62■□□□□ 0.25
COMMD9Q9P000 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
COMMD9Q9P000 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COMMD9Q9P000 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 AC010141.2-201ENST00000452426 721 ntBASIC16.61■□□□□ 0.25
COMMD9Q9P000 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
COMMD9Q9P000 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COMMD9Q9P000 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 FZD10-202ENST00000539839 3282 ntBASIC16.6■□□□□ 0.25
COMMD9Q9P000 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 PKD1P5-201ENST00000532415 10291 ntBASIC16.6■□□□□ 0.25
COMMD9Q9P000 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COMMD9Q9P000 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
COMMD9Q9P000 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
COMMD9Q9P000 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms