Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 AC010980.2-201ENST00000587099 1412 ntBASIC19.3■□□□□ 0.68
MKS1Q9NXB0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 AC009113.1-201ENST00000570267 2443 ntBASIC19.3■□□□□ 0.68
MKS1Q9NXB0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MKS1Q9NXB0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 AC137761.2-201ENST00000561729 223 ntBASIC19.29■□□□□ 0.68
MKS1Q9NXB0 AC145350.3-201ENST00000569033 163 ntBASIC19.29■□□□□ 0.68
MKS1Q9NXB0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 BID-214ENST00000617586 542 ntTSL 5 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 Z98044.1-201ENST00000632503 1764 ntBASIC19.29■□□□□ 0.68
MKS1Q9NXB0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MKS1Q9NXB0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 OR10C1-204ENST00000622521 1039 ntBASIC19.28■□□□□ 0.68
MKS1Q9NXB0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.28■□□□□ 0.68
MKS1Q9NXB0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 KRT17P1-201ENST00000399211 1546 ntBASIC19.27■□□□□ 0.68
MKS1Q9NXB0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MKS1Q9NXB0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms