Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 RN7SKP253-201ENST00000516424 309 ntBASIC22.31■■□□□ 1.16
RNF216Q9NWF9 C1QBPP2-201ENST00000528754 825 ntBASIC22.31■■□□□ 1.16
RNF216Q9NWF9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 C2orf69P4-201ENST00000565394 541 ntBASIC22.31■■□□□ 1.16
RNF216Q9NWF9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 AFG3L1P-217ENST00000557444 2447 ntBASIC22.31■■□□□ 1.16
RNF216Q9NWF9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF216Q9NWF9 AC087633.2-202ENST00000565166 1439 ntBASIC22.31■■□□□ 1.16
RNF216Q9NWF9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 OR51A6P-201ENST00000418680 1004 ntBASIC22.3■■□□□ 1.16
RNF216Q9NWF9 POM121L13P-201ENST00000422362 380 ntBASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AL162385.1-201ENST00000451595 1202 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 PRELID3BP7-201ENST00000503606 469 ntBASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.3■■□□□ 1.16
RNF216Q9NWF9 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 AC008764.6-201ENST00000595909 2069 ntBASIC22.3■■□□□ 1.16
RNF216Q9NWF9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF216Q9NWF9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 TRIM36-IT1-201ENST00000503723 881 ntBASIC22.29■■□□□ 1.16
RNF216Q9NWF9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RNF216Q9NWF9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 AL596275.1-201ENST00000423464 877 ntBASIC22.28■■□□□ 1.16
RNF216Q9NWF9 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 AC098826.2-201ENST00000452011 651 ntBASIC22.28■■□□□ 1.16
RNF216Q9NWF9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF216Q9NWF9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms