Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 MMP23A-201ENST00000234610 1017 ntBASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 AL445228.2-201ENST00000605589 952 ntBASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
POLR1BQ9H9Y6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
POLR1BQ9H9Y6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 AL353807.1-201ENST00000427475 662 ntBASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 AF186192.3-201ENST00000583427 947 ntBASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 AL121829.2-201ENST00000620908 328 ntBASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 SMG8-203ENST00000578922 2178 ntBASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
POLR1BQ9H9Y6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 KRT16P5-201ENST00000455284 522 ntBASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 RN7SL850P-201ENST00000579959 291 ntBASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
POLR1BQ9H9Y6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms