Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.64■□□□□ 0.57
PIF1Q9H611 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PIF1Q9H611 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.63■□□□□ 0.57
PIF1Q9H611 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PIF1Q9H611 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.63■□□□□ 0.57
PIF1Q9H611 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.63■□□□□ 0.57
PIF1Q9H611 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.63■□□□□ 0.57
PIF1Q9H611 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PIF1Q9H611 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PIF1Q9H611 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.63■□□□□ 0.57
PIF1Q9H611 AL031963.3-201ENST00000606441 850 ntBASIC18.63■□□□□ 0.57
PIF1Q9H611 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PIF1Q9H611 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PIF1Q9H611 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.63■□□□□ 0.57
PIF1Q9H611 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
PIF1Q9H611 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PIF1Q9H611 LINC01465-201ENST00000408887 1940 ntBASIC18.62■□□□□ 0.57
PIF1Q9H611 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PIF1Q9H611 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PIF1Q9H611 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.62■□□□□ 0.57
PIF1Q9H611 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.62■□□□□ 0.57
PIF1Q9H611 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.62■□□□□ 0.57
PIF1Q9H611 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.62■□□□□ 0.57
PIF1Q9H611 KRT8P20-201ENST00000423953 1409 ntBASIC18.62■□□□□ 0.57
PIF1Q9H611 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PIF1Q9H611 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.62■□□□□ 0.57
PIF1Q9H611 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PIF1Q9H611 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PIF1Q9H611 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.61■□□□□ 0.57
PIF1Q9H611 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 AP001271.2-201ENST00000624018 1556 ntBASIC18.61■□□□□ 0.57
PIF1Q9H611 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.61■□□□□ 0.57
PIF1Q9H611 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.61■□□□□ 0.57
PIF1Q9H611 AC137761.2-201ENST00000561729 223 ntBASIC18.61■□□□□ 0.57
PIF1Q9H611 AC145350.3-201ENST00000569033 163 ntBASIC18.61■□□□□ 0.57
PIF1Q9H611 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PIF1Q9H611 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
PIF1Q9H611 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.61■□□□□ 0.57
PIF1Q9H611 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PIF1Q9H611 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PIF1Q9H611 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PIF1Q9H611 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.6■□□□□ 0.57
PIF1Q9H611 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PIF1Q9H611 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PIF1Q9H611 AC090340.1-201ENST00000620778 4980 ntBASIC18.6■□□□□ 0.57
PIF1Q9H611 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PIF1Q9H611 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms