Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 ANKRD20A18P-201ENST00000359341 492 ntBASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RTFDC1Q9BY42 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.83■■□□□ 1.4
RTFDC1Q9BY42 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.83■■□□□ 1.4
RTFDC1Q9BY42 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RTFDC1Q9BY42 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 AL441883.1-201ENST00000566170 1045 ntBASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 AC008622.2-201ENST00000617006 1229 ntBASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTFDC1Q9BY42 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 IER3-202ENST00000376377 1350 ntBASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 KRT18P48-201ENST00000434763 852 ntBASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 AL160286.2-201ENST00000567150 934 ntBASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 AL121894.2-201ENST00000602977 491 ntBASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.8■■□□□ 1.4
RTFDC1Q9BY42 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC007375.3-201ENST00000600936 2314 ntBASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 AC116407.4-201ENST00000623319 1061 ntBASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.79■■□□□ 1.4
RTFDC1Q9BY42 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AL671277.2-201ENST00000458060 996 ntBASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.78■■□□□ 1.4
RTFDC1Q9BY42 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms