Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPNE1Q99829 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.53■□□□□ 0.72
CPNE1Q99829 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CPNE1Q99829 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CPNE1Q99829 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CPNE1Q99829 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CPNE1Q99829 CDCA4P2-201ENST00000441182 718 ntBASIC19.53■□□□□ 0.72
CPNE1Q99829 AC005829.2-201ENST00000571422 1056 ntBASIC19.53■□□□□ 0.72
CPNE1Q99829 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.53■□□□□ 0.72
CPNE1Q99829 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.53■□□□□ 0.72
CPNE1Q99829 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPNE1Q99829 AC093503.3-201ENST00000624917 2352 ntBASIC19.52■□□□□ 0.72
CPNE1Q99829 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE1Q99829 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CPNE1Q99829 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.52■□□□□ 0.72
CPNE1Q99829 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.52■□□□□ 0.72
CPNE1Q99829 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.52■□□□□ 0.72
CPNE1Q99829 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.52■□□□□ 0.72
CPNE1Q99829 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CPNE1Q99829 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CPNE1Q99829 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.52■□□□□ 0.71
CPNE1Q99829 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CPNE1Q99829 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
CPNE1Q99829 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.51■□□□□ 0.71
CPNE1Q99829 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.51■□□□□ 0.71
CPNE1Q99829 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.51■□□□□ 0.71
CPNE1Q99829 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CPNE1Q99829 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
CPNE1Q99829 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 MIR663A-201ENST00000385250 93 ntBASIC19.5■□□□□ 0.71
CPNE1Q99829 AC026185.1-201ENST00000445748 174 ntBASIC19.5■□□□□ 0.71
CPNE1Q99829 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CPNE1Q99829 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CPNE1Q99829 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CPNE1Q99829 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CPNE1Q99829 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CPNE1Q99829 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CPNE1Q99829 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CPNE1Q99829 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CPNE1Q99829 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.49■□□□□ 0.71
CPNE1Q99829 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.49■□□□□ 0.71
CPNE1Q99829 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms