Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 Z98044.1-201ENST00000632503 1764 ntBASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB3IPQ96QF0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 AC245052.3-201ENST00000450182 901 ntBASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB3IPQ96QF0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 PKD1P1-201ENST00000458669 6805 ntBASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 SLC47A1P1-202ENST00000449666 945 ntBASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 EEF1DP3-203ENST00000566025 782 ntBASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 AC005224.4-201ENST00000583262 1652 ntBASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.04■□□□□ 0.64
RAB3IPQ96QF0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 KRT16P3-201ENST00000439127 1283 ntBASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 MIR6724-1-201ENST00000616420 92 ntBASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 MIR6724-2-201ENST00000616483 92 ntBASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 MIR6724-4-201ENST00000617390 92 ntBASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 MIR6724-3-201ENST00000622482 92 ntBASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.03■□□□□ 0.64
RAB3IPQ96QF0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms