Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 MIR2861-201ENST00000636310 90 ntBASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NEDD4LQ96PU5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 LINC02228-203ENST00000641970 1355 ntBASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NEDD4LQ96PU5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
NEDD4LQ96PU5 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 AC099398.1-201ENST00000567919 2776 ntBASIC17.21■□□□□ 0.35
NEDD4LQ96PU5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms