Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.44■□□□□ 0.54
COL21A1Q96P44 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL21A1Q96P44 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 CD99P1-205ENST00000527459 561 ntBASIC18.43■□□□□ 0.54
COL21A1Q96P44 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL21A1Q96P44 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
COL21A1Q96P44 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.42■□□□□ 0.54
COL21A1Q96P44 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 AC004408.2-201ENST00000623613 2777 ntBASIC18.42■□□□□ 0.54
COL21A1Q96P44 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL21A1Q96P44 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
COL21A1Q96P44 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 AC093484.2-201ENST00000580996 2166 ntBASIC18.41■□□□□ 0.54
COL21A1Q96P44 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.41■□□□□ 0.54
COL21A1Q96P44 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 UNC93B5-201ENST00000530315 699 ntBASIC18.41■□□□□ 0.54
COL21A1Q96P44 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
COL21A1Q96P44 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COL21A1Q96P44 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms