Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RITA1Q96K30 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RITA1Q96K30 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.7■□□□□ 0.1
RITA1Q96K30 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.69■□□□□ 0.1
RITA1Q96K30 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.69■□□□□ 0.1
RITA1Q96K30 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 AC005332.7-201ENST00000614046 2005 ntBASIC15.69■□□□□ 0.1
RITA1Q96K30 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RITA1Q96K30 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.69■□□□□ 0.1
RITA1Q96K30 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.69■□□□□ 0.1
RITA1Q96K30 AC069544.1-201ENST00000609399 999 ntBASIC15.69■□□□□ 0.1
RITA1Q96K30 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RITA1Q96K30 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.69■□□□□ 0.1
RITA1Q96K30 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.68■□□□□ 0.1
RITA1Q96K30 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
RITA1Q96K30 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RITA1Q96K30 KRT17P3-201ENST00000420566 1262 ntBASIC15.68■□□□□ 0.1
RITA1Q96K30 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RITA1Q96K30 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.68■□□□□ 0.1
RITA1Q96K30 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.68■□□□□ 0.1
RITA1Q96K30 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.68■□□□□ 0.1
RITA1Q96K30 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC15.68■□□□□ 0.1
RITA1Q96K30 MTDHP1-201ENST00000605323 784 ntBASIC15.68■□□□□ 0.1
RITA1Q96K30 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RITA1Q96K30 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RITA1Q96K30 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RITA1Q96K30 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.67■□□□□ 0.1
RITA1Q96K30 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RITA1Q96K30 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.67■□□□□ 0.1
RITA1Q96K30 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.67■□□□□ 0.1
RITA1Q96K30 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.67■□□□□ 0.1
RITA1Q96K30 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.67■□□□□ 0.1
RITA1Q96K30 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.67■□□□□ 0.1
RITA1Q96K30 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.67■□□□□ 0.1
RITA1Q96K30 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.67■□□□□ 0.1
RITA1Q96K30 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RITA1Q96K30 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
RITA1Q96K30 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RITA1Q96K30 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RITA1Q96K30 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RITA1Q96K30 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RITA1Q96K30 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RITA1Q96K30 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RITA1Q96K30 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms