Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 MIR1224-201ENST00000408193 85 ntBASIC17.59■□□□□ 0.41
LRRC46Q96FV0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 AP002982.1-201ENST00000492365 877 ntBASIC17.59■□□□□ 0.41
LRRC46Q96FV0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 AC073195.1-201ENST00000607241 877 ntBASIC17.59■□□□□ 0.41
LRRC46Q96FV0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
LRRC46Q96FV0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.41
LRRC46Q96FV0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC46Q96FV0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LRRC46Q96FV0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.58■□□□□ 0.41
LRRC46Q96FV0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
LRRC46Q96FV0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 AF186192.3-201ENST00000583427 947 ntBASIC17.58■□□□□ 0.4
LRRC46Q96FV0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LRRC46Q96FV0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 KRT8P20-201ENST00000423953 1409 ntBASIC17.57■□□□□ 0.4
LRRC46Q96FV0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 CD177P1-201ENST00000606252 935 ntBASIC17.57■□□□□ 0.4
LRRC46Q96FV0 AC121338.2-201ENST00000622535 1744 ntBASIC17.57■□□□□ 0.4
LRRC46Q96FV0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC46Q96FV0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 AC087499.1-201ENST00000418141 1075 ntBASIC17.56■□□□□ 0.4
LRRC46Q96FV0 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.56■□□□□ 0.4
LRRC46Q96FV0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 AP003071.4-201ENST00000562276 1284 ntBASIC17.56■□□□□ 0.4
LRRC46Q96FV0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC46Q96FV0 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms