Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 AC142381.2-201ENST00000566120 298 ntBASIC19.21■□□□□ 0.67
SPDL1Q96EA4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDL1Q96EA4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 AL138781.2-201ENST00000617896 1843 ntBASIC19.2■□□□□ 0.66
SPDL1Q96EA4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPDL1Q96EA4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 TREX1-205ENST00000625293 1783 ntBASIC19.19■□□□□ 0.66
SPDL1Q96EA4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 AL390961.4-201ENST00000623958 2535 ntBASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPDL1Q96EA4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPDL1Q96EA4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms