Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 DUX4L16-201ENST00000555130 1264 ntBASIC18.76■□□□□ 0.59
VPS33AQ96AX1 CYP2T3P-201ENST00000601990 817 ntBASIC18.76■□□□□ 0.59
VPS33AQ96AX1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
VPS33AQ96AX1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 AC011767.1-201ENST00000617410 1153 ntBASIC18.75■□□□□ 0.59
VPS33AQ96AX1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 AC026471.1-201ENST00000564629 3026 ntBASIC18.75■□□□□ 0.59
VPS33AQ96AX1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS33AQ96AX1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 MIR6821-201ENST00000617625 74 ntBASIC18.74■□□□□ 0.59
VPS33AQ96AX1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VPS33AQ96AX1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.73■□□□□ 0.59
VPS33AQ96AX1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms