Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 AC091799.1-201ENST00000422823 811 ntBASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MBD3L1Q8WWY6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 PTBP1P-201ENST00000554374 1601 ntBASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 AL358852.1-201ENST00000623174 1268 ntBASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 FP475955.4-201ENST00000623131 1990 ntBASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 TEX21P-204ENST00000641479 1693 ntBASIC15.32■□□□□ 0.04
MBD3L1Q8WWY6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 PGM5P4-201ENST00000421970 445 ntBASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
MBD3L1Q8WWY6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms