Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 AC096631.2-201ENST00000436136 790 ntBASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 AL139246.5-201ENST00000606645 996 ntBASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CKAP2Q8WWK9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 FP475955.4-201ENST00000623131 1990 ntBASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 EDA-201ENST00000338901 1233 ntBASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 MIR939-201ENST00000401314 82 ntBASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 MIR6084-201ENST00000622012 110 ntBASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 AC019069.1-201ENST00000610008 1333 ntBASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CKAP2Q8WWK9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AC068880.1-201ENST00000507289 2297 ntBASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CKAP2Q8WWK9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CKAP2Q8WWK9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 AC091305.1-201ENST00000479476 895 ntBASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 PBX2P1-201ENST00000493219 1291 ntBASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 AF213884.3-201ENST00000563833 479 ntBASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CKAP2Q8WWK9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms