Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HMGCLL1Q8TB92 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 AC093503.3-201ENST00000624917 2352 ntBASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 ABHD17AP1-201ENST00000358206 933 ntBASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 ITM2C-210ENST00000620962 501 ntBASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HMGCLL1Q8TB92 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 AC124283.5-201ENST00000624661 1809 ntBASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 AP001271.2-201ENST00000624018 1556 ntBASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HMGCLL1Q8TB92 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 AC128676.1-201ENST00000454392 318 ntBASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 MTDHP1-201ENST00000605323 784 ntBASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 AC073648.6-201ENST00000641589 218 ntBASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGCLL1Q8TB92 AC009237.14-201ENST00000609975 1594 ntBASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGCLL1Q8TB92 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms