Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDH19Q8TAB3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 YBX1P10-201ENST00000444752 975 ntBASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 AL032819.2-201ENST00000624543 2162 ntBASIC20.17■□□□□ 0.82
PCDH19Q8TAB3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 AC006058.3-201ENST00000606217 1069 ntBASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
PCDH19Q8TAB3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 AP003097.1-201ENST00000530657 1135 ntBASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDH19Q8TAB3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms