Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 AL138781.1-201ENST00000566567 1274 ntBASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 AC133041.1-202ENST00000642053 222 ntBASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.89■□□□□ 0.45
LSMEM1Q8N8F7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 RPS2P52-201ENST00000469610 820 ntBASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 PNMA6B-201ENST00000538162 1200 ntBASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AC142086.2-201ENST00000569753 217 ntBASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AC083880.1-201ENST00000608266 535 ntBASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 BX323043.1-201ENST00000641006 1765 ntBASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LSMEM1Q8N8F7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 AC069152.1-201ENST00000438030 544 ntBASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LSMEM1Q8N8F7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 AC104771.1-201ENST00000603335 964 ntBASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.86■□□□□ 0.45
LSMEM1Q8N8F7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms