Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.19■□□□□ 0.98
HERC6Q8IVU3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HERC6Q8IVU3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.18■□□□□ 0.98
HERC6Q8IVU3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 AL450487.1-201ENST00000426799 995 ntBASIC21.18■□□□□ 0.98
HERC6Q8IVU3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 HOMER2P1-201ENST00000455653 964 ntBASIC21.18■□□□□ 0.98
HERC6Q8IVU3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HERC6Q8IVU3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 AL023803.3-201ENST00000615559 522 ntBASIC21.17■□□□□ 0.98
HERC6Q8IVU3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 AL031432.5-201ENST00000641059 760 ntBASIC21.17■□□□□ 0.98
HERC6Q8IVU3 KRT16P6-202ENST00000425692 1426 ntBASIC21.17■□□□□ 0.98
HERC6Q8IVU3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.17■□□□□ 0.98
HERC6Q8IVU3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HERC6Q8IVU3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
HERC6Q8IVU3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 AC005229.4-201ENST00000610085 2198 ntBASIC21.15■□□□□ 0.98
HERC6Q8IVU3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 TSPY17P-201ENST00000450329 467 ntBASIC21.15■□□□□ 0.98
HERC6Q8IVU3 AL671277.2-201ENST00000458060 996 ntBASIC21.15■□□□□ 0.98
HERC6Q8IVU3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.15■□□□□ 0.98
HERC6Q8IVU3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms