Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUDCD3Q8IVD9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUDCD3Q8IVD9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 MFSD11-216ENST00000590393 1141 ntBASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 AC100791.3-201ENST00000617619 330 ntBASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.38■□□□□ 0.69
NUDCD3Q8IVD9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 AC007322.4-201ENST00000509611 723 ntBASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 AC105020.6-201ENST00000621523 1217 ntBASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NUDCD3Q8IVD9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 AL161938.1-201ENST00000569833 2180 ntBASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 AC013268.1-206ENST00000638368 961 ntBASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 AC112229.1-201ENST00000639295 961 ntBASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUDCD3Q8IVD9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms