Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 AC008040.2-201ENST00000461049 708 ntBASIC21.81■■□□□ 1.08
TRIM50Q86XT4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 AC131212.4-201ENST00000623606 975 ntBASIC21.81■■□□□ 1.08
TRIM50Q86XT4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 AL162377.1-201ENST00000618844 1793 ntBASIC21.81■■□□□ 1.08
TRIM50Q86XT4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRIM50Q86XT4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 RCC2P6-201ENST00000526625 1557 ntBASIC21.8■■□□□ 1.08
TRIM50Q86XT4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 AC005521.1-201ENST00000393351 872 ntBASIC21.8■■□□□ 1.08
TRIM50Q86XT4 KRT18P57-201ENST00000443599 1254 ntBASIC21.8■■□□□ 1.08
TRIM50Q86XT4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 AC005363.2-201ENST00000618631 242 ntBASIC21.8■■□□□ 1.08
TRIM50Q86XT4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.8■■□□□ 1.08
TRIM50Q86XT4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 AP001271.2-201ENST00000624018 1556 ntBASIC21.79■■□□□ 1.08
TRIM50Q86XT4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRIM50Q86XT4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 LINC01465-201ENST00000408887 1940 ntBASIC21.78■■□□□ 1.08
TRIM50Q86XT4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 AL157384.1-201ENST00000445995 2473 ntBASIC21.78■■□□□ 1.08
TRIM50Q86XT4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRIM50Q86XT4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM50Q86XT4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms