Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.23■□□□□ 0.35
RTTNQ86VV8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTTNQ86VV8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 BX088651.1-201ENST00000540551 451 ntBASIC17.22■□□□□ 0.35
RTTNQ86VV8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 MTDHP1-201ENST00000605323 784 ntBASIC17.22■□□□□ 0.35
RTTNQ86VV8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.22■□□□□ 0.35
RTTNQ86VV8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTTNQ86VV8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RTTNQ86VV8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 AC069544.1-201ENST00000609399 999 ntBASIC17.21■□□□□ 0.35
RTTNQ86VV8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 RN7SL850P-201ENST00000579959 291 ntBASIC17.21■□□□□ 0.35
RTTNQ86VV8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.21■□□□□ 0.35
RTTNQ86VV8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTTNQ86VV8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTTNQ86VV8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.21■□□□□ 0.34
RTTNQ86VV8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTTNQ86VV8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTTNQ86VV8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 KRT18P35-201ENST00000510488 1269 ntBASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC233263.1-201ENST00000578059 224 ntBASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC006557.6-201ENST00000623071 864 ntBASIC17.2■□□□□ 0.34
RTTNQ86VV8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTTNQ86VV8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.2■□□□□ 0.34
RTTNQ86VV8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms