Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AL512625.2-201ENST00000417533 625 ntBASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC12.57□□□□□ -0.4
MRPL55Q7Z7F7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 AC023632.3-201ENST00000521633 145 ntBASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 AC022517.1-201ENST00000592429 346 ntBASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MRPL55Q7Z7F7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 PHGDH-210ENST00000641115 1638 ntBASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 AC020763.4-201ENST00000623414 4170 ntBASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MRPL55Q7Z7F7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms