Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.89□□□□□ -0.35
SCXQ7RTU7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SCXQ7RTU7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 AC026471.1-201ENST00000564629 3026 ntBASIC12.88□□□□□ -0.35
SCXQ7RTU7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SCXQ7RTU7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SCXQ7RTU7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.87□□□□□ -0.35
SCXQ7RTU7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SCXQ7RTU7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SCXQ7RTU7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.86□□□□□ -0.35
SCXQ7RTU7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SCXQ7RTU7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms