Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 AC012618.2-201ENST00000428058 849 ntBASIC18.76■□□□□ 0.59
RNF44Q7L0R7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF44Q7L0R7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 MIR718-201ENST00000390190 70 ntBASIC18.75■□□□□ 0.59
RNF44Q7L0R7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 C1QL1P1-201ENST00000568105 661 ntBASIC18.75■□□□□ 0.59
RNF44Q7L0R7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF44Q7L0R7 HTR7P1-201ENST00000538670 1336 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AL135905.2-201ENST00000584934 1404 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AC112907.3-201ENST00000577781 2400 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AL353807.1-201ENST00000427475 662 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 AC233702.5-201ENST00000584107 538 ntBASIC18.74■□□□□ 0.59
RNF44Q7L0R7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF44Q7L0R7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 RPS2P55-201ENST00000397318 883 ntBASIC18.73■□□□□ 0.59
RNF44Q7L0R7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF44Q7L0R7 AC107956.1-201ENST00000494359 873 ntBASIC18.73■□□□□ 0.59
RNF44Q7L0R7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms