Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
LCA10Q71F78 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LCA10Q71F78 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
LCA10Q71F78 AC103702.1-201ENST00000548801 2630 ntBASIC10.53□□□□□ -0.72
LCA10Q71F78 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10.52□□□□□ -0.72
LCA10Q71F78 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
LCA10Q71F78 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
LCA10Q71F78 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
LCA10Q71F78 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
LCA10Q71F78 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
LCA10Q71F78 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
LCA10Q71F78 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.52□□□□□ -0.73
LCA10Q71F78 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
LCA10Q71F78 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.52□□□□□ -0.73
LCA10Q71F78 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC10.52□□□□□ -0.73
LCA10Q71F78 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
LCA10Q71F78 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
LCA10Q71F78 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC10.52□□□□□ -0.73
LCA10Q71F78 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC10.51□□□□□ -0.73
LCA10Q71F78 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 OR2I1P-207ENST00000453522 948 ntBASIC10.51□□□□□ -0.73
LCA10Q71F78 AC010141.3-201ENST00000456659 717 ntBASIC10.51□□□□□ -0.73
LCA10Q71F78 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC10.51□□□□□ -0.73
LCA10Q71F78 MIR3181-201ENST00000578512 73 ntBASIC10.51□□□□□ -0.73
LCA10Q71F78 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 OXCT2P1-201ENST00000447263 1535 ntBASIC10.51□□□□□ -0.73
LCA10Q71F78 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC10.51□□□□□ -0.73
LCA10Q71F78 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
LCA10Q71F78 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.51□□□□□ -0.73
LCA10Q71F78 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms