Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 UPK3BP1-201ENST00000428678 509 ntBASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 KRT8P8-201ENST00000434750 1448 ntBASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC149Q6ZUS6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 AP001271.2-201ENST00000624018 1556 ntBASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 AC063952.2-201ENST00000498792 1227 ntBASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC149Q6ZUS6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 HMGA1P5-201ENST00000412453 271 ntBASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 FAM207BP-201ENST00000447172 505 ntBASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC149Q6ZUS6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 AL358472.4-201ENST00000633140 710 ntBASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC149Q6ZUS6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 INGX-201ENST00000359239 846 ntBASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC149Q6ZUS6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms