Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.85■□□□□ 0.29
COLCA1Q6ZS62 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COLCA1Q6ZS62 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.83■□□□□ 0.29
COLCA1Q6ZS62 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 NBPF21P-201ENST00000425093 1451 ntBASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 ZNF815P-204ENST00000434898 1737 ntBASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.83■□□□□ 0.28
COLCA1Q6ZS62 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 AC007952.6-201ENST00000573168 2673 ntBASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 AC003957.1-201ENST00000625108 2673 ntBASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 RN7SL471P-201ENST00000580476 299 ntBASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COLCA1Q6ZS62 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
COLCA1Q6ZS62 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms