Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRFN4Q6PJG9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 HCG11-201ENST00000411553 5696 ntBASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AC006557.6-201ENST00000623071 864 ntBASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AC092368.3-202ENST00000574180 1591 ntBASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 AC009237.14-201ENST00000609975 1594 ntBASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRFN4Q6PJG9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.55■□□□□ 0.4
LRFN4Q6PJG9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PHGDH-210ENST00000641115 1638 ntBASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 PNMA6B-201ENST00000538162 1200 ntBASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 AC060766.5-201ENST00000590539 871 ntBASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.54■□□□□ 0.4
LRFN4Q6PJG9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms