Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 UNC93B2-201ENST00000285383 730 ntBASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 AC131212.4-201ENST00000623606 975 ntBASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SWSAP1Q6NVH7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 MESTP1-201ENST00000404287 994 ntBASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 AP000525.1-201ENST00000608286 694 ntBASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SWSAP1Q6NVH7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 MMP23A-201ENST00000234610 1017 ntBASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 AC011506.1-201ENST00000474329 610 ntBASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 AC133561.5-201ENST00000635547 218 ntBASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SWSAP1Q6NVH7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 MIR6786-201ENST00000616843 113 ntBASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SWSAP1Q6NVH7 FSCN1P1-201ENST00000568912 1481 ntBASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 B3GAT3P1-201ENST00000471720 806 ntBASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 AC026271.3-201ENST00000571884 352 ntBASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.77■■□□□ 1.08
SWSAP1Q6NVH7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SWSAP1Q6NVH7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms