Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.19■□□□□ 0.66
CGB2Q6NT52 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CGB2Q6NT52 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.19■□□□□ 0.66
CGB2Q6NT52 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGB2Q6NT52 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CGB2Q6NT52 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CGB2Q6NT52 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.18■□□□□ 0.66
CGB2Q6NT52 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CGB2Q6NT52 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CGB2Q6NT52 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CGB2Q6NT52 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB2Q6NT52 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CGB2Q6NT52 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CGB2Q6NT52 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.16■□□□□ 0.66
CGB2Q6NT52 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 EDA-201ENST00000338901 1233 ntBASIC19.15■□□□□ 0.66
CGB2Q6NT52 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 PBX2P1-201ENST00000493219 1291 ntBASIC19.15■□□□□ 0.66
CGB2Q6NT52 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CGB2Q6NT52 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.15■□□□□ 0.66
CGB2Q6NT52 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms