Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.23■■□□□ 1.15
PPP4R3AQ6IN85 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP4R3AQ6IN85 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP4R3AQ6IN85 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PPP4R3AQ6IN85 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 TUBB8P6-201ENST00000436895 1288 ntBASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
PPP4R3AQ6IN85 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.2■■□□□ 1.15
PPP4R3AQ6IN85 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.2■■□□□ 1.15
PPP4R3AQ6IN85 TREX1-205ENST00000625293 1783 ntBASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 NME1-207ENST00000480143 964 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 AFG3L1P-217ENST00000557444 2447 ntBASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP4R3AQ6IN85 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 FAM197Y4-202ENST00000622692 608 ntBASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PPP4R3AQ6IN85 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 KRT8P8-201ENST00000434750 1448 ntBASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 AL158047.1-201ENST00000445918 881 ntBASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 UBE2SP1-201ENST00000450587 669 ntBASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP4R3AQ6IN85 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP4R3AQ6IN85 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms