Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
USH1GQ495M9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.47■■□□□ 1.19
USH1GQ495M9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USH1GQ495M9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.47■■□□□ 1.19
USH1GQ495M9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.47■■□□□ 1.19
USH1GQ495M9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC22.47■■□□□ 1.19
USH1GQ495M9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.47■■□□□ 1.19
USH1GQ495M9 HLA-A-209ENST00000638375 975 ntBASIC22.47■■□□□ 1.19
USH1GQ495M9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
USH1GQ495M9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USH1GQ495M9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
USH1GQ495M9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.46■■□□□ 1.19
USH1GQ495M9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
USH1GQ495M9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.46■■□□□ 1.19
USH1GQ495M9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
USH1GQ495M9 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 AL390955.1-201ENST00000428694 934 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 AC004980.1-204ENST00000429707 299 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.46■■□□□ 1.19
USH1GQ495M9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 AC116562.2-201ENST00000507042 360 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.46■■□□□ 1.19
USH1GQ495M9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.46■■□□□ 1.19
USH1GQ495M9 LINC01023-201ENST00000606054 436 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.46■■□□□ 1.19
USH1GQ495M9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
USH1GQ495M9 KRT8P8-201ENST00000434750 1448 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
USH1GQ495M9 AC009237.14-201ENST00000609975 1594 ntBASIC22.46■■□□□ 1.19
USH1GQ495M9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.46■■□□□ 1.19
USH1GQ495M9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.46■■□□□ 1.19
USH1GQ495M9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
USH1GQ495M9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
USH1GQ495M9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USH1GQ495M9 TCF3P1-201ENST00000423021 1937 ntBASIC22.45■■□□□ 1.18
USH1GQ495M9 PCDHAC2-203ENST00000615316 3011 ntBASIC22.45■■□□□ 1.18
USH1GQ495M9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USH1GQ495M9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.45■■□□□ 1.18
USH1GQ495M9 MMP23A-201ENST00000234610 1017 ntBASIC22.45■■□□□ 1.18
USH1GQ495M9 MIR1238-201ENST00000408483 83 ntBASIC22.45■■□□□ 1.18
USH1GQ495M9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USH1GQ495M9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
USH1GQ495M9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.45■■□□□ 1.18
USH1GQ495M9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
USH1GQ495M9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
USH1GQ495M9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
USH1GQ495M9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
USH1GQ495M9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.44■■□□□ 1.18
USH1GQ495M9 KRT8P9-201ENST00000558927 1449 ntBASIC22.44■■□□□ 1.18
USH1GQ495M9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.44■■□□□ 1.18
USH1GQ495M9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.44■■□□□ 1.18
USH1GQ495M9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
USH1GQ495M9 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.44■■□□□ 1.18
USH1GQ495M9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.44■■□□□ 1.18
USH1GQ495M9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
USH1GQ495M9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
USH1GQ495M9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.43■■□□□ 1.18
USH1GQ495M9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
USH1GQ495M9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.43■■□□□ 1.18
USH1GQ495M9 MESTP1-201ENST00000404287 994 ntBASIC22.43■■□□□ 1.18
USH1GQ495M9 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.43■■□□□ 1.18
USH1GQ495M9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.43■■□□□ 1.18
USH1GQ495M9 MIR6786-201ENST00000616843 113 ntBASIC22.43■■□□□ 1.18
USH1GQ495M9 AC131212.4-201ENST00000623606 975 ntBASIC22.43■■□□□ 1.18
USH1GQ495M9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
USH1GQ495M9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 LINC01465-201ENST00000408887 1940 ntBASIC22.43■■□□□ 1.18
USH1GQ495M9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
USH1GQ495M9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
USH1GQ495M9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms