Protein–RNA interactions for Protein: Q494R4

CCDC153, Coiled-coil domain-containing protein 153, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC153Q494R4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 AC116351.2-201ENST00000606540 1585 ntBASIC19.32■□□□□ 0.68
CCDC153Q494R4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.32■□□□□ 0.68
CCDC153Q494R4 MIR6821-201ENST00000617625 74 ntBASIC19.32■□□□□ 0.68
CCDC153Q494R4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 AC231657.2-201ENST00000624556 255 ntBASIC19.32■□□□□ 0.68
CCDC153Q494R4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC153Q494R4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC153Q494R4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 AIRN-201ENST00000601203 4374 ntBASIC19.31■□□□□ 0.68
CCDC153Q494R4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC153Q494R4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CCDC153Q494R4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 AL161938.1-201ENST00000569833 2180 ntBASIC19.3■□□□□ 0.68
CCDC153Q494R4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 CROCCP3-202ENST00000420820 1947 ntBASIC19.3■□□□□ 0.68
CCDC153Q494R4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC153Q494R4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC153Q494R4 AC141586.3-201ENST00000562166 1838 ntBASIC19.3■□□□□ 0.68
CCDC153Q494R4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC153Q494R4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC153Q494R4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms