Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRB3P79483 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HLA-DRB3P79483 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 AC120498.9-201ENST00000339021 3867 ntBASIC16.34■□□□□ 0.21
HLA-DRB3P79483 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 MIR5787-201ENST00000611784 55 ntBASIC16.34■□□□□ 0.21
HLA-DRB3P79483 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB3P79483 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.33■□□□□ 0.21
HLA-DRB3P79483 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB3P79483 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB3P79483 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HLA-DRB3P79483 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 GPX1P1-201ENST00000388829 606 ntBASIC16.33■□□□□ 0.2
HLA-DRB3P79483 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 AC018553.1-201ENST00000616682 1458 ntBASIC16.33■□□□□ 0.2
HLA-DRB3P79483 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB3P79483 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 AC004408.2-201ENST00000623613 2777 ntBASIC16.32■□□□□ 0.2
HLA-DRB3P79483 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 AC116351.2-201ENST00000606540 1585 ntBASIC16.32■□□□□ 0.2
HLA-DRB3P79483 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB3P79483 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms