Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL39P62891 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.82□□□□□ -0.2
RPL39P62891 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RPL39P62891 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RPL39P62891 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL39P62891 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
RPL39P62891 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL39P62891 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
RPL39P62891 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL39P62891 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RPL39P62891 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL39P62891 AL161938.1-201ENST00000569833 2180 ntBASIC13.81□□□□□ -0.2
RPL39P62891 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPL39P62891 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL39P62891 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.8□□□□□ -0.2
RPL39P62891 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.8□□□□□ -0.2
RPL39P62891 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.8□□□□□ -0.2
RPL39P62891 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
RPL39P62891 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
RPL39P62891 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL39P62891 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL39P62891 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
RPL39P62891 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 FZD10-202ENST00000539839 3282 ntBASIC13.79□□□□□ -0.2
RPL39P62891 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RPL39P62891 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL39P62891 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPL39P62891 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RPL39P62891 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL39P62891 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RPL39P62891 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL39P62891 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms