Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1AP62820 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1AP62820 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.17■□□□□ 0.34
RAB1AP62820 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RAB1AP62820 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1AP62820 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1AP62820 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1AP62820 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1AP62820 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1AP62820 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1AP62820 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB1AP62820 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RAB1AP62820 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RAB1AP62820 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB1AP62820 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.16■□□□□ 0.34
RAB1AP62820 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RAB1AP62820 C1QBPP2-201ENST00000528754 825 ntBASIC17.16■□□□□ 0.34
RAB1AP62820 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
RAB1AP62820 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1AP62820 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB1AP62820 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 AC239809.2-201ENST00000415381 517 ntBASIC17.15■□□□□ 0.34
RAB1AP62820 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB1AP62820 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB1AP62820 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.15■□□□□ 0.34
RAB1AP62820 TMEM191A-211ENST00000637163 1067 ntBASIC17.15■□□□□ 0.34
RAB1AP62820 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 NBPF21P-201ENST00000425093 1451 ntBASIC17.15■□□□□ 0.34
RAB1AP62820 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB1AP62820 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB1AP62820 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
RAB1AP62820 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB1AP62820 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1AP62820 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1AP62820 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB1AP62820 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB1AP62820 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB1AP62820 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1AP62820 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1AP62820 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1AP62820 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1AP62820 PRORSD1P-201ENST00000295112 541 ntBASIC17.14■□□□□ 0.33
RAB1AP62820 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms