Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.58□□□□□ -0.08
CMC4P56277 AC092667.1-201ENST00000434301 2586 ntBASIC14.58□□□□□ -0.08
CMC4P56277 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.58□□□□□ -0.08
CMC4P56277 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.57□□□□□ -0.08
CMC4P56277 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.57□□□□□ -0.08
CMC4P56277 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.57□□□□□ -0.08
CMC4P56277 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CMC4P56277 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CMC4P56277 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 AP002982.1-201ENST00000492365 877 ntBASIC14.57□□□□□ -0.08
CMC4P56277 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.57□□□□□ -0.08
CMC4P56277 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CMC4P56277 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.57□□□□□ -0.08
CMC4P56277 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.57□□□□□ -0.08
CMC4P56277 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 USP48-205ENST00000421625 2818 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CMC4P56277 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.57□□□□□ -0.08
CMC4P56277 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.57□□□□□ -0.08
CMC4P56277 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.56□□□□□ -0.08
CMC4P56277 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.56□□□□□ -0.08
CMC4P56277 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CMC4P56277 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CMC4P56277 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.56□□□□□ -0.08
CMC4P56277 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.55□□□□□ -0.08
CMC4P56277 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.55□□□□□ -0.08
CMC4P56277 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CMC4P56277 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CMC4P56277 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms