Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PAX9P55771 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.68■□□□□ 0.1
PAX9P55771 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.68■□□□□ 0.1
PAX9P55771 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.68■□□□□ 0.1
PAX9P55771 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PAX9P55771 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.68■□□□□ 0.1
PAX9P55771 BICD1-207ENST00000551848 1962 ntBASIC15.67■□□□□ 0.1
PAX9P55771 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
PAX9P55771 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 AC093525.10-201ENST00000625130 1569 ntBASIC15.67■□□□□ 0.1
PAX9P55771 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PAX9P55771 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.67■□□□□ 0.1
PAX9P55771 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.67■□□□□ 0.1
PAX9P55771 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 AC016405.3-201ENST00000607710 860 ntBASIC15.67■□□□□ 0.1
PAX9P55771 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.67■□□□□ 0.1
PAX9P55771 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
PAX9P55771 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PAX9P55771 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.67■□□□□ 0.1
PAX9P55771 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.66■□□□□ 0.1
PAX9P55771 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.66■□□□□ 0.1
PAX9P55771 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 FP475955.4-201ENST00000623131 1990 ntBASIC15.66■□□□□ 0.1
PAX9P55771 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PAX9P55771 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 HLA-G-202ENST00000376815 851 ntBASIC15.66■□□□□ 0.1
PAX9P55771 HLA-G-203ENST00000376818 1127 ntBASIC15.66■□□□□ 0.1
PAX9P55771 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.66■□□□□ 0.1
PAX9P55771 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.66■□□□□ 0.1
PAX9P55771 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.66■□□□□ 0.1
PAX9P55771 UBE2DNL-204ENST00000602536 740 ntBASIC15.66■□□□□ 0.1
PAX9P55771 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.66■□□□□ 0.1
PAX9P55771 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PAX9P55771 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms