Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN1P54253 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN1P54253 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.53■□□□□ 0.88
ATXN1P54253 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.53■□□□□ 0.88
ATXN1P54253 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.53■□□□□ 0.88
ATXN1P54253 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ATXN1P54253 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
ATXN1P54253 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.52■□□□□ 0.88
ATXN1P54253 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.52■□□□□ 0.88
ATXN1P54253 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.52■□□□□ 0.88
ATXN1P54253 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.52■□□□□ 0.88
ATXN1P54253 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ATXN1P54253 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATXN1P54253 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.52■□□□□ 0.88
ATXN1P54253 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.52■□□□□ 0.88
ATXN1P54253 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN1P54253 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
ATXN1P54253 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
ATXN1P54253 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.52■□□□□ 0.87
ATXN1P54253 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
ATXN1P54253 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATXN1P54253 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN1P54253 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ATXN1P54253 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
ATXN1P54253 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN1P54253 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.51■□□□□ 0.87
ATXN1P54253 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.51■□□□□ 0.87
ATXN1P54253 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 MTDHP1-201ENST00000605323 784 ntBASIC20.51■□□□□ 0.87
ATXN1P54253 AL121906.2-201ENST00000621597 723 ntBASIC20.51■□□□□ 0.87
ATXN1P54253 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
ATXN1P54253 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATXN1P54253 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
ATXN1P54253 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 AL355075.4-201ENST00000554988 638 ntBASIC20.5■□□□□ 0.87
ATXN1P54253 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.5■□□□□ 0.87
ATXN1P54253 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.5■□□□□ 0.87
ATXN1P54253 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.5■□□□□ 0.87
ATXN1P54253 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.5■□□□□ 0.87
ATXN1P54253 AL121829.2-201ENST00000620908 328 ntBASIC20.5■□□□□ 0.87
ATXN1P54253 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.5■□□□□ 0.87
ATXN1P54253 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATXN1P54253 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ATXN1P54253 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
ATXN1P54253 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.49■□□□□ 0.87
ATXN1P54253 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
ATXN1P54253 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATXN1P54253 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms