Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCNKAP51800 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLCNKAP51800 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.18■□□□□ 0.66
CLCNKAP51800 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.18■□□□□ 0.66
CLCNKAP51800 CD177P1-201ENST00000606252 935 ntBASIC19.18■□□□□ 0.66
CLCNKAP51800 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CLCNKAP51800 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLCNKAP51800 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
CLCNKAP51800 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLCNKAP51800 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.18■□□□□ 0.66
CLCNKAP51800 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCNKAP51800 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCNKAP51800 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.17■□□□□ 0.66
CLCNKAP51800 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLCNKAP51800 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CLCNKAP51800 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 TSPY7P-201ENST00000431358 1114 ntBASIC19.17■□□□□ 0.66
CLCNKAP51800 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCNKAP51800 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.17■□□□□ 0.66
CLCNKAP51800 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.17■□□□□ 0.66
CLCNKAP51800 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLCNKAP51800 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CLCNKAP51800 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLCNKAP51800 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
CLCNKAP51800 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLCNKAP51800 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CLCNKAP51800 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CLCNKAP51800 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CLCNKAP51800 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.16■□□□□ 0.66
CLCNKAP51800 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.16■□□□□ 0.66
CLCNKAP51800 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.16■□□□□ 0.66
CLCNKAP51800 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.16■□□□□ 0.66
CLCNKAP51800 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.16■□□□□ 0.66
CLCNKAP51800 AL445675.2-201ENST00000620291 557 ntBASIC19.16■□□□□ 0.66
CLCNKAP51800 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.16■□□□□ 0.66
CLCNKAP51800 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
CLCNKAP51800 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLCNKAP51800 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.15■□□□□ 0.66
CLCNKAP51800 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLCNKAP51800 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLCNKAP51800 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLCNKAP51800 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLCNKAP51800 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms