Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC1A6P48664 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC1A6P48664 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SLC1A6P48664 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC1A6P48664 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A6P48664 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 AC007613.1-201ENST00000572811 2597 ntBASIC19.2■□□□□ 0.66
SLC1A6P48664 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A6P48664 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SLC1A6P48664 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A6P48664 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC1A6P48664 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 AC020763.4-201ENST00000623414 4170 ntBASIC19.2■□□□□ 0.66
SLC1A6P48664 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC1A6P48664 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 AC006333.2-201ENST00000607957 2099 ntBASIC19.2■□□□□ 0.66
SLC1A6P48664 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC1A6P48664 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC1A6P48664 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC1A6P48664 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLC1A6P48664 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 AC023632.3-201ENST00000521633 145 ntBASIC19.19■□□□□ 0.66
SLC1A6P48664 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC1A6P48664 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC1A6P48664 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC1A6P48664 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.19■□□□□ 0.66
SLC1A6P48664 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC1A6P48664 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SLC1A6P48664 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC1A6P48664 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A6P48664 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A6P48664 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC1A6P48664 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC1A6P48664 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A6P48664 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC1A6P48664 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SLC1A6P48664 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC1A6P48664 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A6P48664 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC1A6P48664 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC1A6P48664 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A6P48664 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC1A6P48664 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC1A6P48664 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms