Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.57■□□□□ 0.56
GABRA4P48169 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.57■□□□□ 0.56
GABRA4P48169 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GABRA4P48169 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.57■□□□□ 0.56
GABRA4P48169 AC011506.1-201ENST00000474329 610 ntBASIC18.57■□□□□ 0.56
GABRA4P48169 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.57■□□□□ 0.56
GABRA4P48169 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.57■□□□□ 0.56
GABRA4P48169 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.57■□□□□ 0.56
GABRA4P48169 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GABRA4P48169 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GABRA4P48169 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
GABRA4P48169 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GABRA4P48169 AC112907.3-201ENST00000577781 2400 ntBASIC18.57■□□□□ 0.56
GABRA4P48169 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.56■□□□□ 0.56
GABRA4P48169 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.56■□□□□ 0.56
GABRA4P48169 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
GABRA4P48169 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GABRA4P48169 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.56■□□□□ 0.56
GABRA4P48169 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.56■□□□□ 0.56
GABRA4P48169 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.56■□□□□ 0.56
GABRA4P48169 AC087499.1-201ENST00000418141 1075 ntBASIC18.56■□□□□ 0.56
GABRA4P48169 B3GAT3P1-201ENST00000471720 806 ntBASIC18.56■□□□□ 0.56
GABRA4P48169 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.56■□□□□ 0.56
GABRA4P48169 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.56■□□□□ 0.56
GABRA4P48169 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
GABRA4P48169 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
GABRA4P48169 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
GABRA4P48169 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.55■□□□□ 0.56
GABRA4P48169 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.55■□□□□ 0.56
GABRA4P48169 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
GABRA4P48169 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.55■□□□□ 0.56
GABRA4P48169 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.55■□□□□ 0.56
GABRA4P48169 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
GABRA4P48169 MIR6786-201ENST00000616843 113 ntBASIC18.55■□□□□ 0.56
GABRA4P48169 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
GABRA4P48169 AC131212.4-201ENST00000623606 975 ntBASIC18.55■□□□□ 0.56
GABRA4P48169 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.55■□□□□ 0.56
GABRA4P48169 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.55■□□□□ 0.56
GABRA4P48169 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
GABRA4P48169 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 PKD1P6-201ENST00000343738 4769 ntBASIC18.55■□□□□ 0.56
GABRA4P48169 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
GABRA4P48169 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.54■□□□□ 0.56
GABRA4P48169 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.54■□□□□ 0.56
GABRA4P48169 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
GABRA4P48169 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 AC211429.1-201ENST00000415277 523 ntBASIC18.54■□□□□ 0.56
GABRA4P48169 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.54■□□□□ 0.56
GABRA4P48169 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.54■□□□□ 0.56
GABRA4P48169 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.54■□□□□ 0.56
GABRA4P48169 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
GABRA4P48169 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.53■□□□□ 0.56
GABRA4P48169 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 FSCN1P1-201ENST00000568912 1481 ntBASIC18.53■□□□□ 0.56
GABRA4P48169 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
GABRA4P48169 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 UNC93B2-201ENST00000285383 730 ntBASIC18.53■□□□□ 0.56
GABRA4P48169 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
GABRA4P48169 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms