Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 MIR935-201ENST00000401179 91 ntBASIC20.46■□□□□ 0.87
SLC1A1P43005 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC1A1P43005 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC1A1P43005 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 MIR4758-201ENST00000577688 71 ntBASIC20.46■□□□□ 0.87
SLC1A1P43005 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 AC006557.6-201ENST00000623071 864 ntBASIC20.46■□□□□ 0.87
SLC1A1P43005 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC1A1P43005 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC1A1P43005 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SLC1A1P43005 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A1P43005 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A1P43005 HLA-B-256ENST00000639848 1089 ntBASIC20.45■□□□□ 0.86
SLC1A1P43005 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC1A1P43005 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A1P43005 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SLC1A1P43005 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC1A1P43005 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC1A1P43005 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A1P43005 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC1A1P43005 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC1A1P43005 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.44■□□□□ 0.86
SLC1A1P43005 RPS2P52-201ENST00000469610 820 ntBASIC20.44■□□□□ 0.86
SLC1A1P43005 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.44■□□□□ 0.86
SLC1A1P43005 AC097658.1-201ENST00000475555 843 ntBASIC20.44■□□□□ 0.86
SLC1A1P43005 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.44■□□□□ 0.86
SLC1A1P43005 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A1P43005 MYC-209ENST00000641252 345 ntBASIC20.44■□□□□ 0.86
SLC1A1P43005 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SLC1A1P43005 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC1A1P43005 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A1P43005 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.44■□□□□ 0.86
SLC1A1P43005 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A1P43005 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC1A1P43005 ZNF815P-204ENST00000434898 1737 ntBASIC20.43■□□□□ 0.86
SLC1A1P43005 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A1P43005 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 AL020996.1-203ENST00000536896 2307 ntBASIC20.43■□□□□ 0.86
SLC1A1P43005 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A1P43005 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A1P43005 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC1A1P43005 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SLC1A1P43005 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A1P43005 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SLC1A1P43005 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SLC1A1P43005 AC124283.5-201ENST00000624661 1809 ntBASIC20.42■□□□□ 0.86
SLC1A1P43005 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.42■□□□□ 0.86
SLC1A1P43005 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.42■□□□□ 0.86
SLC1A1P43005 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC1A1P43005 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC1A1P43005 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A1P43005 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms