Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AL691432.3-201ENST00000621860 400 ntBASIC29.43■■■□□ 2.3
KDM5CP41229 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
KDM5CP41229 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC29.42■■■□□ 2.3
KDM5CP41229 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
KDM5CP41229 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
KDM5CP41229 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC29.42■■■□□ 2.3
KDM5CP41229 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
KDM5CP41229 AC246785.2-201ENST00000432512 513 ntBASIC29.42■■■□□ 2.3
KDM5CP41229 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC29.42■■■□□ 2.3
KDM5CP41229 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC29.42■■■□□ 2.3
KDM5CP41229 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC29.42■■■□□ 2.3
KDM5CP41229 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
KDM5CP41229 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
KDM5CP41229 KRT8P8-201ENST00000434750 1448 ntBASIC29.41■■■□□ 2.3
KDM5CP41229 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
KDM5CP41229 FXN-203ENST00000396366 922 ntTSL 2 BASIC29.41■■■□□ 2.3
KDM5CP41229 STARP1-201ENST00000397973 869 ntBASIC29.41■■■□□ 2.3
KDM5CP41229 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
KDM5CP41229 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.41■■■□□ 2.3
KDM5CP41229 LY6E-213ENST00000522528 606 ntTSL 3 BASIC29.41■■■□□ 2.3
KDM5CP41229 NT5C-210ENST00000582160 860 ntTSL 2 BASIC29.41■■■□□ 2.3
KDM5CP41229 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC29.41■■■□□ 2.3
KDM5CP41229 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC29.41■■■□□ 2.3
KDM5CP41229 KRT8P45-201ENST00000414328 1447 ntBASIC29.41■■■□□ 2.3
KDM5CP41229 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 SNX5-210ENST00000481323 562 ntTSL 3 BASIC29.4■■■□□ 2.3
KDM5CP41229 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC29.4■■■□□ 2.3
KDM5CP41229 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC29.4■■■□□ 2.3
KDM5CP41229 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
KDM5CP41229 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
KDM5CP41229 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
KDM5CP41229 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
KDM5CP41229 CKBP1-201ENST00000565489 1086 ntBASIC29.39■■■□□ 2.3
KDM5CP41229 NEK4P2-201ENST00000580004 1012 ntBASIC29.39■■■□□ 2.3
KDM5CP41229 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.39■■■□□ 2.3
KDM5CP41229 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
KDM5CP41229 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.39■■■□□ 2.3
KDM5CP41229 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC29.39■■■□□ 2.3
KDM5CP41229 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC29.39■■■□□ 2.3
KDM5CP41229 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
KDM5CP41229 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC29.39■■■□□ 2.3
KDM5CP41229 AC026310.3-201ENST00000625186 2373 ntBASIC29.39■■■□□ 2.3
KDM5CP41229 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
KDM5CP41229 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC29.39■■■□□ 2.3
KDM5CP41229 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
KDM5CP41229 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
KDM5CP41229 FEM1AP4-201ENST00000443167 1987 ntBASIC29.39■■■□□ 2.29
KDM5CP41229 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.29
KDM5CP41229 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.39■■■□□ 2.29
KDM5CP41229 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC29.39■■■□□ 2.29
KDM5CP41229 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.39■■■□□ 2.29
KDM5CP41229 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.29
KDM5CP41229 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
KDM5CP41229 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
KDM5CP41229 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 PLK5-205ENST00000642079 1969 ntBASIC29.38■■■□□ 2.29
KDM5CP41229 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 ERF-202ENST00000440177 2032 ntTSL 2 BASIC29.38■■■□□ 2.29
KDM5CP41229 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
KDM5CP41229 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC29.38■■■□□ 2.29
KDM5CP41229 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC29.38■■■□□ 2.29
KDM5CP41229 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
KDM5CP41229 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC29.38■■■□□ 2.29
KDM5CP41229 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC29.38■■■□□ 2.29
KDM5CP41229 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC29.37■■■□□ 2.29
KDM5CP41229 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
KDM5CP41229 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 KRT8P41-201ENST00000533985 1514 ntBASIC29.37■■■□□ 2.29
KDM5CP41229 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC29.37■■■□□ 2.29
KDM5CP41229 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
KDM5CP41229 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC29.36■■■□□ 2.29
KDM5CP41229 AP000523.1-201ENST00000398242 1049 ntBASIC29.36■■■□□ 2.29
KDM5CP41229 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KDM5CP41229 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.36■■■□□ 2.29
KDM5CP41229 IRF5-214ENST00000613821 595 ntTSL 5 BASIC29.36■■■□□ 2.29
KDM5CP41229 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KDM5CP41229 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC29.36■■■□□ 2.29
KDM5CP41229 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KDM5CP41229 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.36■■■□□ 2.29
KDM5CP41229 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC29.36■■■□□ 2.29
KDM5CP41229 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
KDM5CP41229 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
KDM5CP41229 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
KDM5CP41229 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
KDM5CP41229 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC29.35■■■□□ 2.29
KDM5CP41229 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms