Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.49□□□□□ -0.25
RPL13AP40429 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RPL13AP40429 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.48□□□□□ -0.25
RPL13AP40429 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.48□□□□□ -0.25
RPL13AP40429 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.48□□□□□ -0.25
RPL13AP40429 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RPL13AP40429 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RPL13AP40429 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.48□□□□□ -0.25
RPL13AP40429 AP000997.3-201ENST00000623333 2250 ntBASIC13.48□□□□□ -0.25
RPL13AP40429 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RPL13AP40429 AC138969.2-201ENST00000532739 9932 ntBASIC13.48□□□□□ -0.25
RPL13AP40429 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RPL13AP40429 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
RPL13AP40429 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RPL13AP40429 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.48□□□□□ -0.25
RPL13AP40429 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RPL13AP40429 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 AC019069.1-201ENST00000610008 1333 ntBASIC13.47□□□□□ -0.25
RPL13AP40429 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.47□□□□□ -0.25
RPL13AP40429 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
RPL13AP40429 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.47□□□□□ -0.25
RPL13AP40429 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RPL13AP40429 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.46□□□□□ -0.25
RPL13AP40429 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.46□□□□□ -0.25
RPL13AP40429 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.46□□□□□ -0.25
RPL13AP40429 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC13.46□□□□□ -0.25
RPL13AP40429 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
RPL13AP40429 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.46□□□□□ -0.25
RPL13AP40429 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RPL13AP40429 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC13.46□□□□□ -0.25
RPL13AP40429 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.46□□□□□ -0.25
RPL13AP40429 MIR4466-201ENST00000606121 54 ntBASIC13.46□□□□□ -0.25
RPL13AP40429 AC241377.3-202ENST00000626088 1088 ntBASIC13.46□□□□□ -0.25
RPL13AP40429 AC241585.3-202ENST00000628937 1088 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms